Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LAML rs9398838 chr6:127635285 C/T 1.86E-5 111 0.98 16.27 15.17 KM Plot
LAML rs9398839 chr6:127665863 G/A 1.86E-5 111 0.98 16.27 15.17 KM Plot
LAML rs9398840 chr6:127669744 G/A 1.86E-5 111 0.98 16.27 15.17 KM Plot
LAML rs9398841 chr6:127670134 G/T 2.02E-5 110 0.98 16.27 14.18 KM Plot
LAML rs9401950 chr6:127655485 C/T 1.86E-5 111 0.98 16.27 15.17 KM Plot
LAML rs9401951 chr6:127671632 A/C 1.86E-5 111 0.98 16.27 15.17 KM Plot
LAML rs9432620 chr1:95405971 C/T 8.61E-5 111 13.1 22.37 0 KM Plot
LAML rs950946 chr4:16038752 G/T 0.000134 111 15.23 13.1 0 KM Plot
LAML rs9509630 chr13:21844314 G/A 1.06E-8 109 16.2 13.1 0 KM Plot
LAML rs9509633 chr13:21844482 G/C 1.06E-8 109 16.2 13.1 0 KM Plot
LAML rs9513185 chr13:97477270 T/C 7.85E-5 110 13.1 23.3 7.07 KM Plot
LAML rs9517725 chr13:100085133 T/C 1.48E-5 111 2.02 13.2 16.2 KM Plot
LAML rs9525293 chr13:114946692 C/T 3.42E-6 109 13.2 19.23 0 KM Plot
LAML rs9542494 chr13:71336207 A/C 1.71E-5 111 0 5 16.23 KM Plot
LAML rs9553849 chr13:27082326 A/G 4.26E-6 111 1 16.23 15.17 KM Plot